Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875346.1_cds_XP_016435774.1_31700
CDS Infomation

[gene=LOC107761986] [db_xref=GeneID:107761986] [protein=pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like] [protein_id=XP_016435774.1] [location=complement(join(22490..23671,24479..24793))] [gbkey=CDS]
Sequence

ATGTTGGGGAGCTTAAACCAGTGTTCAGTAGCACCACAGGCCCCCAAGCCAATAAACTCA
ATGAACTACGCAACCTTTAATCGATCAATTTCTTACAATCTTCTGCGTAGGGCTTTCCCA
ATCCGCGCATACTGTACTGTCCATTCCTCAAAGGGTAATAATTTGTTTTCCAGAATTAGC
CCTGTTAGGCGCGCGGATCTCATTATTCCAGTTCTGGATCAATGGGTGGTCGAGGGCAGA
AAAGTCACAAGCCTCGAGCTTCAGCGCATTGTTCGTGATCTCCGTAGCCGTAAACGTTTT
TCTCAAGCCCTACAGGTTTCCGAGTGGATGAGTGTGAGTGGTCTCTGCCCTTTCAAGTCG
GGAGATTGTGCTGTGCATTTGGATCTTATTGGTGTTGTCCATGGTTGGGAAGCGGCAGAG
TGCTACTTTAATAACCTCACAGATGAACAGAAGAATGATAAGACTTATGGTGCACTCTTC
AAGTGTTATATTAGAGAAGGCCTAGTTGAGAAATCCCTAGCCCATTTTCAGAAAATGAAG
GAACTTGGTTATGCTTACTGCACTCTTGTTTACAACAATCTCATGTGCCTTTACAGAAGT
ACAGGCCAACTCGAGCGAGTCTCTGATGTGCTGTCGGCGATGAAGGAGAATGGTGTCACC
CCTAATAACTTCAGCTATCGGATCTGCATCAATTGCTGTGGAGAAAGAGCTGATTTTAGT
GGTATGGAGAAGCTTCTTGAAGAAATGGAAAGCCAGCCTTTCATATCAGTGGACTGGATC
ACCTATTCCATGATGGCTAATGTTTATATAAAAGCTGAGTTCAAGGAGAAGGCTCTTGCT
TTCTTGAAAAAGTTAGAAGATAAGCTACATAAAGATCCAATAGGTTACAATCATTTGATT
TCCCACTATGCGAATCTAGGCAATAAGGAAGAGATGTTGAGATTGTGGGGTGTACAAAAG
ATTGTGTGTAAAAAGCAAATTAACAGGGACTACATCACCATGCTAGGTTCCTTGGTTAAG
CTTGGTGATCTAGAGACAGCTGAGGCCATGCTAAAGGAGTGGGAGTCTTCTAACCACACT
TATGATTTTAGAGTGCCAAATGTCCTACTAATTGGATATTGCCAGAATGGCTTAGTTGAT
AAAGCCGAAATAATGCTGCAAGACATTATCAAGAAAGGTAAGACACCAATCCCGAATAGT
TGGGCTATCATTGCTGCAGGGTACTTGAATACGCATAAGATGGAAAAGGCCTTTGAATGC
CTGAAAGAAGCAATAGCAGTACGAGCACAAAATCCAGGATGGAGACCAAAACCCCATCTG
GTATCAACCATAAGCAAATGGCTCGGTGACCAACATGACACTAGAGAACAAGAGGCTTTC
CTTAGCTCGTTAAAGACGGTAGTTACTGTAAATAAAGATGTGCATGATACCCTTGGAAAC
ACAGAAGCCAGTGGAATAGGAGAAAAGAATGAAATTGAAGAAATTGTTAAGCTATGA

Peptide Sequence

PEP ID

XP_016435774.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Nicotiana tabacum]
Sequence

MLGSLNQCSVAPQAPKPINSMNYATFNRSISYNLLRRAFPIRAYCTVHSSKGNNLFSRIS
PVRRADLIIPVLDQWVVEGRKVTSLELQRIVRDLRSRKRFSQALQVSEWMSVSGLCPFKS
GDCAVHLDLIGVVHGWEAAECYFNNLTDEQKNDKTYGALFKCYIREGLVEKSLAHFQKMK
ELGYAYCTLVYNNLMCLYRSTGQLERVSDVLSAMKENGVTPNNFSYRICINCCGERADFS
GMEKLLEEMESQPFISVDWITYSMMANVYIKAEFKEKALAFLKKLEDKLHKDPIGYNHLI
SHYANLGNKEEMLRLWGVQKIVCKKQINRDYITMLGSLVKLGDLETAEAMLKEWESSNHT
YDFRVPNVLLIGYCQNGLVDKAEIMLQDIIKKGKTPIPNSWAIIAAGYLNTHKMEKAFEC
LKEAIAVRAQNPGWRPKPHLVSTISKWLGDQHDTREQEAFLSSLKTVVTVNKDVHDTLGN
TEASGIGEKNEIEEIVKL

Transcript Sequence

Gene sequence data has not been registered.